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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1592
ChIP-seq
1249
total RNA-seq
325
ATAC-seq
182
single cell RNA-seq
181
DNase-seq
87
RNA microarray
40
pCHi-C
28
snATAC-seq
20
Hi-C
16
WGBS
10
MeRIP-seq
5
GRO-seq
5
RRBS
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
FAIRE-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
2
DNA accessibility
1
Transcription
Date released
July, 2019
1
August, 2017
1
March, 2023
1
November, 2018
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
Organism
2
Homo sapiens
Biosample type
2
tissue
primary cell
1
stem cell
Organ
2
pancreas
Project
2
AMP
1
community
Genome assembly (visualization)
2
hg19
Lab
2
AMP-T2D consortium
1
Anna Gloyn, Oxford
biosample_type!
primary cell
month_released!
July, 2019
BIOSAMPLE
ASSAY
3 results
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FAIRE-seq
CRISPR RNA-seq
tissue
islet of Langerhans
1
pancreas
1
stem cell
SB Ad3.1
1
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