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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1714
ChIP-seq
1412
total RNA-seq
497
ATAC-seq
369
single cell RNA-seq
212
DNase-seq
87
RNA microarray
75
WGBS
66
snATAC-seq
40
pCHi-C
33
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
snDrop-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
2
Transcription
Date released
2
March, 2023
Biosample type
1
cell line
1
stem cell
Project
2
community
Lab
2
Anna Gloyn, Oxford
assay_title!
CRISPRi RNA-seq
audit.WARNING.category!
inconsistent assembly
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
2 results
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CRISPR RNA-seq
siRNA RNA-seq
cell line
EndoC-BH1
1
stem cell
SB Ad3.1
1