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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
835
ChIP-seq
367
total RNA-seq
180
ATAC-seq
119
single cell RNA-seq
56
snATAC-seq
32
pCHi-C
15
DNase-seq
10
Hi-C
5
GRO-seq
5
STARR-seq
4
RRBS
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
2
small RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA methylation
Date released
3
February, 2023
1
May, 2021
Organism
4
Homo sapiens
Biosample type
3
cell line
1
primary cell
Project
3
T1D
1
AMP
Lab
3
Kyle Gaulton, UCSD
1
AMP-T2D consortium
biosample_type!
tissue
files.file_type!
tagAlign bed3+
organ_slims!
epithelium
BIOSAMPLE
ASSAY
4 results
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CRISPR genome editing followed by DNA sequencing
DNAme array
cell line
EndoC_BH1
3
primary cell
monocyte
1