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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
464
total RNA-seq
141
ChIP-seq
23
ATAC-seq
6
WGBS
3
DNase-seq
3
pCHi-C
2
Capture-C
2
small RNA-seq
1
RNA microarray
0
CRISPR genome editing followed by DNA sequencing
0
MeRIP-seq
Assay category
6
DNA methylation
3
DNA accessibility
Date released
7
August, 2017
1
June, 2019
1
November, 2018
Available data
5
bam
5
bigWig
5
fastq
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
Organism
9
Homo sapiens
Biosample type
8
tissue
primary cell
1
in vitro differentiated cells
Organ
69
kidney
37
limb
35
heart
33
musculature of body
27
brain
22
pancreas
18
ureter
9
connective tissue
9
liver
8
adipose tissue
7
blood vessel
7
epithelium
7
vasculature
4
artery
3
eye
3
spleen
2
nerve
Project
9
AMP
Genome assembly (visualization)
5
GRCh38
3
hg19
Lab
9
AMP-T2D consortium
biosample_type!
primary cell
BIOSAMPLE
ASSAY
9 results
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WGBS
DNase-seq
tissue
adipose tissue
3
subcutaneous abdominal adipose tissue
3
omental fat pad
2
in vitro differentiated cells
adipocyte
1
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