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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
293
ChIP-seq
277
ATAC-seq
263
single cell RNA-seq
190
total RNA-seq
86
RNA microarray
84
snATAC-seq
56
pCHi-C
25
Hi-C
15
RRBS
10
WGBS
5
GRO-seq
5
STARR-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
DNase-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
84
February, 2021
3
February, 2023
1
August, 2021
1
December, 2019
Available data
84
txt
1
tsv
Organism
88
Homo sapiens
Biosample type
86
tissue
3
cell line
Organ
84
bone element
2
kidney
1
adipose tissue
1
connective tissue
epithelium
Project
86
AMP
3
T1D
Lab
86
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
1
audit script error
files.file_type!
bam
month_released!
December, 2018
organ_slims!
epithelium
BIOSAMPLE
ASSAY
89 results
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RNA microarray
CRISPR genome editing followed by DNA sequencing
tissue
bone element
84
kidney interstitium
1
subcutaneous adipose tissue
1
cell line
EndoC_BH1
3
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