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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
218
ChIP-seq
152
ATAC-seq
80
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
2
DNA accessibility
Date released
1
August, 2017
1
February, 2023
1
November, 2018
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
Organism
2
Homo sapiens
Biosample type
2
tissue
1
cell line
Organ
3
pancreas
2
epithelium
1
blood vessel
1
brain
1
kidney
1
vasculature
1
vein
Project
3
AMP
Genome assembly (visualization)
2
hg19
Lab
3
AMP-T2D consortium
organ_slims!
ovary
BIOSAMPLE
ASSAY
3 results
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FAIRE-seq
CRISPR genome editing followed by sgRNA sequencing
tissue
islet of Langerhans
1
pancreas
1
cell line
EndoC_BH1
1
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