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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1279
total RNA-seq
1276
ChIP-seq
261
ATAC-seq
186
DNase-seq
103
single cell RNA-seq
27
Hi-C
19
RRBS
18
small RNA-seq
5
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
0
CRISPR genome editing followed by sgRNA sequencing
Assay category
103
Transcription
Target of assay
control
Date released
49
April, 2018
48
July, 2018
3
August, 2018
3
June, 2018
Available data
103
bam
103
bigWig
103
tsv
98
fastq
Organism
103
Homo sapiens
Biosample type
97
primary cell
6
tissue
Organ
80
pancreas
70
epithelium
4
connective tissue
Project
103
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
103
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
103 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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tissue
islet of Langerhans
6
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