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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
218
ChIP-seq
152
ATAC-seq
80
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
80
Transcription
Date released
39
April, 2018
37
July, 2018
3
August, 2018
1
February, 2023
1
June, 2018
Available data
80
bam
80
bigWig
80
tsv
75
fastq
Organism
80
Homo sapiens
Biosample type
74
primary cell
6
tissue
1
cell line
Organ
93
heart
81
pancreas
71
epithelium
64
kidney
9
lung
6
blood vessel
6
vasculature
4
connective tissue
3
brain
2
artery
1
liver
1
musculature of body
Project
81
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
81
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
files.file_type!
bed bed3
BIOSAMPLE
ASSAY
81 results
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single cell RNA-seq
CRISPR genome editing followed by sgRNA sequencing
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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tissue
islet of Langerhans
6
cell line
EndoC_BH1
1
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