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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1783
ChIP-seq
1330
total RNA-seq
471
ATAC-seq
228
single cell RNA-seq
212
DNase-seq
87
RNA microarray
40
pCHi-C
30
Hi-C
28
WGBS
21
RRBS
18
small RNA-seq
10
MeRIP-seq
8
snATAC-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
snDrop-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
8
DNA accessibility
Date released
6
August, 2021
1
August, 2022
1
February, 2023
1
May, 2022
Available data
1
bed bed3+
1
txt
Organism
8
Homo sapiens
Biosample type
8
tissue
1
cell line
Organ
6
kidney
2
pancreas
1
epithelium
1
musculature of body
Project
48
HPAP
18
T1D
10
LungMap
9
AMP
Genome assembly (visualization)
1
hg19
Lab
6
Katalin Susztak, Upenn
3
AMP-T2D consortium
Audit category:
2
audit script error
files.file_type!
vcf
month_released!
March, 2023
BIOSAMPLE
ASSAY
9 results
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snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
tissue
kidney
6
islet of Langerhans
1
skeletal muscle tissue
1
cell line
EndoC_BH1
1
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