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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1455
total RNA-seq
1345
ChIP-seq
484
ATAC-seq
276
single cell RNA-seq
182
DNase-seq
87
RNA microarray
84
snATAC-seq
67
WGBS
54
pCHi-C
31
Hi-C
19
RRBS
17
small RNA-seq
5
FAIRE-seq
5
GRO-seq
5
MeRIP-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
Transcription
Date released
84
February, 2021
2
December, 2019
1
August, 2021
1
March, 2023
Available data
84
txt
2
tsv
Organism
86
Homo sapiens
Biosample type
87
tissue
1
stem cell
Organ
84
bone element
2
kidney
1
adipose tissue
1
connective tissue
1
epithelium
Project
87
AMP
1
community
Lab
87
AMP-T2D consortium
1
Anna Gloyn, Oxford
Audit category:
84
inconsistent ontology term
2
audit script error
files.file_type!
tagAlign
organ_slims!
heart
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
88 results
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RNA microarray
CRISPRi RNA-seq
tissue
bone element
84
kidney interstitium
1
renal glomerulus
1
subcutaneous adipose tissue
1
stem cell
SB Ad3.1
1
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