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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1683
ChIP-seq
1356
total RNA-seq
452
ATAC-seq
367
single cell RNA-seq
208
DNase-seq
87
RNA microarray
75
WGBS
66
snATAC-seq
40
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
snDrop-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA sequencing
1
Transcription
Date released
6
August, 2021
1
March, 2023
Available data
1
vcf
Organism
6
Homo sapiens
Biosample type
6
cell line
1
stem cell
Organ
3
liver
2
kidney
Project
6
AMP
1
community
Lab
6
Bing Ren, UCSD
1
Anna Gloyn, Oxford
Audit category:
1
inconsistent ontology term
lab.title!
Kyle Gaulton, UCSD
organ_slims!
artery
BIOSAMPLE
ASSAY
7 results
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STARR-seq
CRISPRi RNA-seq
whole genome sequencing assay
cell line
HepG2
2
1
HEK293T
2
Synthesized DNA
1
stem cell
SB Ad3.1
1
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