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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1451
ChIP-seq
816
total RNA-seq
306
ATAC-seq
182
single cell RNA-seq
178
DNase-seq
86
RNA microarray
37
pCHi-C
28
snATAC-seq
24
Hi-C
22
WGBS
14
small RNA-seq
11
RRBS
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
2
August, 2021
Organism
2
Homo sapiens
Biosample type
2
cell line
Organ
connective tissue
2
epithelium
2
pancreas
Project
2
AMP
Lab
2
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
CRISPR genome editing followed by sgRNA sequencing
biosample_type!
primary cell
lab.title!
Mark McCarthy, Oxford
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
2 results
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Capture-C
cell line
EndoC_BH1
2