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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1273
ChIP-seq
1253
total RNA-seq
247
ATAC-seq
186
DNase-seq
106
single cell RNA-seq
27
Hi-C
19
RRBS
18
small RNA-seq
5
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
0
MeRIP-seq
Assay category
106
Transcription
Target of assay
3
control
Date released
49
April, 2018
48
July, 2018
3
August, 2018
3
July, 2019
3
June, 2018
2
August, 2021
Available data
106
bam
106
bigWig
106
tsv
98
fastq
2
bed bed3+
Organism
108
Homo sapiens
Biosample type
100
primary cell
6
tissue
2
in vitro differentiated cells
Organ
80
pancreas
70
epithelium
6
connective tissue
3
brain
Project
108
AMP
Genome assembly (visualization)
108
hg19
106
GRCh38
Lab
106
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
7
inconsistent ontology term
month_released!
September, 2018
BIOSAMPLE
ASSAY
108 results
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single cell RNA-seq
Capture-C
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 13 more…
tissue
islet of Langerhans
6
in vitro differentiated cells
adipocyte
1
osteoblast
1
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