Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
218
ChIP-seq
152
ATAC-seq
80
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
11
DNA accessibility
Date released
8
January, 2021
2
August, 2021
2
February, 2023
1
August, 2022
Organism
13
Homo sapiens
Biosample type
11
tissue
2
cell line
Organ
13
pancreas
10
lung
8
blood
8
bodily fluid
6
kidney
2
connective tissue
2
epithelium
1
musculature of body
Project
10
T1D
3
AMP
Lab
10
Kyle Gaulton, UCSD
3
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
organ_slims!
lymph node
BIOSAMPLE
ASSAY
13 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
Capture-C
tissue
islet of Langerhans
7
pancreas
4
cell line
EndoC_BH1
2