Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
ATAC-seq
97
total RNA-seq
87
single cell RNA-seq
56
snATAC-seq
47
WGBS
37
ChIP-seq
16
pCHi-C
10
Hi-C
10
RRBS
2
DNase-seq
1
DNAme array
0
Capture-C
Assay category
97
Transcription
Date released
76
February, 2023
16
September, 2020
3
May, 2021
2
May, 2020
Available data
152
bigWig
bam
150
tsv
120
fastq
2
bed bed3+
Organism
97
Homo sapiens
Biosample type
129
tissue
97
primary cell
11
cell line
11
in vitro differentiated cells
Organ
53
epithelium
53
pancreas
Project
92
HPAP
5
AMP
Genome assembly (visualization)
2
hg19
Lab
92
Klaus Kaestner, Upenn
3
AMP-T2D consortium
2
Kyle Gaulton, UCSD
files.file_type!
bam
organ_slims!
nerve
BIOSAMPLE
ASSAY
97 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
primary cell
pancreatic alpha cell
42
exocrine cell
39
pancreatic beta cell
11
CD8-positive, alpha-beta T cell
2
monocyte
1
+ See 2 more…
See all biosamples
Download