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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
22
ChIP-seq
18
small RNA-seq
15
RRBS
12
WGBS
8
Hi-C
3
single cell RNA-seq
ATAC-seq
Assay category
22
DNA binding
Target of assay
21
control
1
histone
1
histone modification
1
narrow histone mark
Date released
164
August, 2017
93
November, 2017
68
October, 2019
45
May, 2021
29
October, 2018
23
May, 2019
23
May, 2020
22
December, 2017
15
April, 2019
13
August, 2021
9
October, 2017
8
February, 2018
8
June, 2019
7
November, 2018
6
September, 2017
4
December, 2018
4
January, 2019
3
February, 2021
2
November, 2019
0
July, 2019
Available data
94
bam
94
fastq
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
15
bed bed3+
Organism
22
Homo sapiens
Biosample type
12
tissue
9
in vitro differentiated cells
1
stem cell
Organ
13
liver
5
embryo
3
epithelium
Project
22
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
22
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
assay_title!
ATAC-seq
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
tissue
liver
9
right lobe of liver
3
in vitro differentiated cells
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
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stem cell
hESC
1
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