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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
341
ChIP-seq
Assay category
341
DNA binding
Target of assay
197
transcription factor
71
control
71
histone
71
histone modification
66
recombinant protein
42
broad histone mark
30
RNA binding protein
29
narrow histone mark
11
chromatin remodeller
other context
1
other post-translational modification
Date released
341
November, 2017
283
August, 2017
240
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
67
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
390
bam
332
bigWig
322
fastq
311
bed narrowPeak
310
bigBed narrowPeak
78
tagAlign
69
bed broadPeak
bigBed broadPeak
3
tar
Organism
341
Homo sapiens
Biosample type
256
cell line
82
tissue
3
primary cell
Organ
256
liver
85
brain
2
epithelium
2
vasculature
1
blood vessel
Project
341
AMP
Genome assembly (visualization)
229
GRCh38
216
hg19
Lab
341
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
assay_title!
ATAC-seq
files.file_type!
bigBed broadPeak
target.investigated_as!
other context
BIOSAMPLE
ASSAY
341 results
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Clear Filters
ChIP-seq
cell line
HepG2
256
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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