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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
33
DNase-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
single cell RNA-seq
1
snATAC-seq
Assay category
39
DNA binding
Target of assay
33
histone
33
histone modification
20
broad histone mark
13
narrow histone mark
6
control
Date released
22
August, 2017
10
June, 2019
7
May, 2019
Available data
27
bed narrowPeak
27
bigWig
17
bam
15
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
Organism
39
Homo sapiens
Biosample type
29
tissue
10
primary cell
Organ
552
liver
218
brain
217
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
39
AMP
Genome assembly (visualization)
27
hg19
13
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
FAIRE-seq
single cell RNA-seq
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue
22
muscle of leg
7
primary cell
skeletal muscle satellite cell
8
skeletal muscle cell
2
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