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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
ChIP-seq
29
total RNA-seq
21
ATAC-seq
10
DNase-seq
5
Hi-C
4
pCHi-C
FAIRE-seq
Assay category
98
DNA binding
Target of assay
191
histone
191
histone modification
narrow histone mark
52
broad histone mark
39
control
7
recombinant protein
7
transcription factor
Date released
173
August, 2017
101
May, 2021
98
October, 2019
86
May, 2019
63
October, 2018
60
November, 2017
57
April, 2019
34
December, 2018
25
May, 2024
22
December, 2017
22
January, 2019
21
November, 2018
20
June, 2019
17
September, 2018
16
February, 2018
14
August, 2021
13
October, 2017
9
November, 2019
8
February, 2021
6
September, 2017
Available data
98
bam
56
bigWig
54
bed narrowPeak
38
bigBed narrowPeak
9
tagAlign
2
bed broadPeak
2
bigBed broadPeak
Organism
98
Homo sapiens
Biosample type
63
tissue
20
cell line
15
primary cell
Organ
46
limb
30
blood vessel
30
vasculature
27
nerve
19
artery
16
kidney
15
epithelium
11
vein
10
brain
10
pancreas
3
heart
liver
Project
98
AMP
Genome assembly (visualization)
56
hg19
54
GRCh38
Lab
98
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
assay_title!
FAIRE-seq
organ_slims!
liver
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
27
tibial artery
19
brain
3
heart
3
kidney
2
+ See 9 more…
cell line
Panc1
10
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
endothelial cell of umbilical vein
11
epithelial cell of proximal tubule
4
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