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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
9
DNase-seq
8
ATAC-seq
Assay category
58
DNA binding
Target of assay
35
histone
35
histone modification
23
transcription factor
18
narrow histone mark
16
broad histone mark
10
RNA binding protein
2
chromatin remodeller
Date released
44
August, 2017
9
June, 2019
5
October, 2018
Available data
102
bam
90
fastq
75
bigWig
58
bed narrowPeak
22
tagAlign
15
bigBed narrowPeak
11
bed bed3+
1
bed broadPeak
Organism
58
Homo sapiens
Biosample type
42
in vitro differentiated cells
9
primary cell
7
tissue
Organ
413
liver
170
brain
140
pancreas
114
heart
97
epithelium
75
vasculature
73
blood vessel
58
connective tissue
54
blood
54
bodily fluid
48
limb
39
kidney
27
musculature of body
25
artery
24
nerve
14
embryo
12
spleen
10
vein
7
adipose tissue
2
eye
1
pituitary gland
Project
58
AMP
Genome assembly (visualization)
58
hg19
57
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
Audit category:
6
inconsistent control read length
assay_title!
Hi-C
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
in vitro differentiated cells
adipocyte
42
primary cell
mesenchymal stem cell
6
cardiac fibroblast
3
tissue
omental fat pad
3
subcutaneous adipose tissue
2
adipose tissue
1
subcutaneous abdominal adipose tissue
1
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