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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
7
DNase-seq
5
Hi-C
5
total RNA-seq
4
single cell RNA-seq
2
WGBS
1
ATAC-seq
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
69
DNA binding
Target of assay
52
histone
52
histone modification
31
broad histone mark
21
narrow histone mark
13
control
4
RNA binding protein
4
transcription factor
Date released
45
May, 2019
18
October, 2019
6
November, 2017
Available data
68
bam
54
bigWig
50
bed narrowPeak
50
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
6
fastq
Organism
69
Homo sapiens
Biosample type
46
tissue
23
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
69
AMP
Genome assembly (visualization)
54
hg19
50
GRCh38
Lab
69
AMP-T2D consortium
assay_title!
HiChIP
organ_slims!
artery
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
tissue
ascending aorta
16
thoracic aorta
16
aorta
13
islet of Langerhans
1
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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