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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
150
ChIP-seq
9
DNase-seq
7
WGBS
4
ATAC-seq
1
FAIRE-seq
1
Hi-C
1
single cell RNA-seq
Assay category
150
DNA binding
Target of assay
70
transcription factor
60
histone
60
histone modification
37
broad histone mark
25
RNA binding protein
23
narrow histone mark
20
control
16
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
0
March, 2019
Available data
149
bam
128
bed narrowPeak
128
bigWig
127
bigBed narrowPeak
70
fastq
Organism
150
Homo sapiens
Biosample type
90
tissue
60
cell line
Organ
57
heart
49
liver
23
kidney
15
blood
15
bodily fluid
6
spleen
Project
150
AMP
Genome assembly (visualization)
127
GRCh38
126
hg19
Lab
150
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
MeRIP-seq
BIOSAMPLE
ASSAY
150 results
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Clear Filters
ChIP-seq
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
spleen
6
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cell line
HepG2
45
GM12878
15
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