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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
total RNA-seq
84
RNA microarray
30
ATAC-seq
11
ChIP-seq
9
pCHi-C
9
single cell RNA-seq
6
MeRIP-seq
5
Hi-C
2
Capture-C
1
RRBS
STARR-seq
Assay category
11
DNA binding
Target of assay
11
control
Date released
3
June, 2019
3
October, 2019
2
December, 2017
2
November, 2019
1
May, 2019
Available data
55
bam
bed narrowPeak
44
bigWig
17
bigBed narrowPeak
4
fastq
3
tagAlign
Organism
11
Homo sapiens
Biosample type
5
cell line
4
primary cell
2
in vitro differentiated cells
Organ
6
epithelium
5
kidney
2
connective tissue
2
embryo
2
pancreas
heart
1
musculature of body
Project
11
AMP
Lab
11
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
assay_title!
STARR-seq
files.file_type!
bed narrowPeak
organ_slims!
heart
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
cell line
EndoC_BH1
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
epithelial cell of proximal tubule
1
kidney epithelial cell
1
mesenchymal stem cell
1
skeletal muscle satellite cell
1
in vitro differentiated cells
Hepatic endoderm
2
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