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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
68
ChIP-seq
6
ATAC-seq
WGBS
3
small RNA-seq
2
DNase-seq
2
pCHi-C
Assay category
68
DNA binding
Target of assay
32
histone
32
histone modification
24
control
20
broad histone mark
17
transcription factor
12
narrow histone mark
RNA binding protein
Date released
50
August, 2017
18
October, 2018
Available data
32
bam
32
fastq
14
bigWig
8
tagAlign
4
bed bed3+
2
bed narrowPeak
1
bed broadPeak
1
bigBed narrowPeak
Organism
68
Homo sapiens
Biosample type
68
tissue
Organ
473
liver
215
brain
209
pancreas
143
connective tissue
123
heart
117
epithelium
97
vasculature
95
blood vessel
68
adipose tissue
66
limb
50
blood
50
bodily fluid
49
kidney
39
musculature of body
35
nerve
33
artery
22
embryo
20
spleen
17
vein
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
68
AMP
Genome assembly (visualization)
14
hg19
13
GRCh38
Lab
68
AMP-T2D consortium
Audit category:
12
missing controlled_by
assay_title!
WGBS
month_released!
August, 2021
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
68 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
white adipose tissue
12
subcutaneous adipose tissue
10
omental fat pad
8
adipose tissue
2
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