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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
25
DNA binding
Target of assay
19
histone
19
histone modification
12
broad histone mark
7
narrow histone mark
6
control
Date released
22
August, 2017
2
June, 2019
1
May, 2019
Available data
27
bed narrowPeak
27
bigWig
17
bam
15
tagAlign
bigBed narrowPeak
13
bed broadPeak
Organism
25
Homo sapiens
Biosample type
23
tissue
2
primary cell
Organ
200
liver
159
pancreas
138
connective tissue
124
brain
93
epithelium
70
heart
67
adipose tissue
31
vasculature
30
blood vessel
28
kidney
25
musculature of body
22
embryo
18
limb
13
artery
11
nerve
8
spleen
7
vein
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
1
lymph node
1
pituitary gland
Project
25
AMP
Genome assembly (visualization)
13
hg19
Lab
25
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
pCHi-C
files.file_type!
bigBed narrowPeak
month_released!
August, 2020
BIOSAMPLE
ASSAY
25 results
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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue
22
muscle of leg
1
primary cell
skeletal muscle cell
1
skeletal muscle satellite cell
1
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