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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
ATAC-seq
97
total RNA-seq
87
single cell RNA-seq
56
snATAC-seq
47
WGBS
37
ChIP-seq
16
pCHi-C
10
Hi-C
10
RRBS
2
DNase-seq
1
DNAme array
Assay category
37
DNA binding
Target of assay
34
histone
34
histone modification
22
broad histone mark
12
narrow histone mark
3
control
Date released
37
May, 2021
Available data
247
bigWig
bam
226
bed narrowPeak
100
tagAlign
94
fastq
57
bigBed narrowPeak
21
bed broadPeak
21
bigBed broadPeak
3
bed bed3+
Organism
37
Homo sapiens
Biosample type
185
tissue
52
in vitro differentiated cells
37
primary cell
19
cell line
Project
37
AMP
Genome assembly (visualization)
33
hg19
Lab
33
Kyle Gaulton, UCSD
4
AMP-T2D consortium
assay_title!
small RNA-seq
files.file_type!
bam
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
primary cell
CD8-positive, alpha-beta T cell
33
naive thymus-derived CD4-positive, alpha-beta T cell
2
monocyte
1
neutrophil
1
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