Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
68
DNase-seq
64
single cell RNA-seq
50
total RNA-seq
27
ChIP-seq
6
snATAC-seq
snDrop-seq
2
RNA microarray
1
FAIRE-seq
1
Hi-C
1
RRBS
1
small RNA-seq
Assay category
27
DNA binding
1
3D chromatin structure
Target of assay
20
histone
20
histone modification
10
broad histone mark
10
narrow histone mark
6
control
1
RNA binding protein
1
transcription factor
Date released
23
April, 2019
4
October, 2019
1
August, 2021
Available data
27
bam
20
bed narrowPeak
20
bigWig
18
bigBed narrowPeak
1
hic
Organism
28
Homo sapiens
Biosample type
28
tissue
15
primary cell
10
cell line
Organ
209
brain
156
liver
126
heart
121
pancreas
74
blood vessel
74
connective tissue
74
vasculature
73
adipose tissue
70
limb
35
musculature of body
35
nerve
28
artery
28
kidney
20
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
28
AMP
Genome assembly (visualization)
21
hg19
20
GRCh38
Lab
27
AMP-T2D consortium
1
Katalin Susztak, Upenn
assay_title!
snDrop-seq
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
tissue
kidney
27
1
Download