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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
3
WGBS
3
single cell RNA-seq
2
ATAC-seq
1
pCHi-C
0
HiChIP
Assay category
90
DNA binding
Target of assay
39
transcription factor
26
histone
26
histone modification
25
control
13
narrow histone mark
12
broad histone mark
9
RNA binding protein
2
chromatin remodeller
Date released
67
August, 2017
23
October, 2018
Available data
102
bam
90
fastq
75
bigWig
58
bed narrowPeak
22
tagAlign
15
bigBed narrowPeak
11
bed bed3+
bed broadPeak
Organism
90
Homo sapiens
Biosample type
53
in vitro differentiated cells
37
tissue
Organ
394
liver
141
pancreas
90
connective tissue
68
epithelium
60
blood
60
bodily fluid
37
adipose tissue
22
embryo
20
spleen
9
brain
2
vasculature
1
blood vessel
Project
90
AMP
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
90
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
53
tissue
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
adipose tissue
2
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