Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
102
DNA binding
1
DNA methylation
Target of assay
71
histone
71
histone modification
45
broad histone mark
26
narrow histone mark
22
control
9
transcription factor
5
RNA binding protein
Date released
50
May, 2019
40
October, 2019
6
February, 2021
6
November, 2017
1
July, 2019
Available data
102
bam
79
bigWig
75
bed narrowPeak
71
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
6
fastq
6
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
103
Homo sapiens
Biosample type
73
tissue
24
primary cell
6
cell line
Organ
554
liver
220
brain
220
pancreas
154
connective tissue
136
heart
135
epithelium
103
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
56
kidney
44
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
6
eye
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
Project
103
AMP
Genome assembly (visualization)
80
hg19
75
GRCh38
Lab
103
AMP-T2D consortium
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
103 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
RRBS
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
primary cell
endothelial cell of umbilical vein
17
choroid plexus epithelial cell
3
1
brain microvascular endothelial cell
3
cell line
smooth muscle cell of the coronary artery
6
Download