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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
33
DNase-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
0
shRNA RNA-seq
Assay category
39
DNA binding
2
Transcription
Target of assay
33
histone
33
histone modification
20
broad histone mark
13
narrow histone mark
6
control
Date released
22
August, 2017
10
June, 2019
7
May, 2019
2
July, 2019
Available data
29
bigWig
27
bed narrowPeak
19
bam
15
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
2
tsv
Organism
41
Homo sapiens
Biosample type
30
tissue
11
primary cell
Organ
555
liver
222
brain
220
pancreas
156
connective tissue
135
heart
129
epithelium
102
vasculature
99
blood vessel
76
adipose tissue
66
limb
60
blood
60
bodily fluid
53
kidney
41
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
41
AMP
Genome assembly (visualization)
29
hg19
15
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ChIP-seq
small RNA-seq
tissue
skeletal muscle tissue
22
1
muscle of leg
7
primary cell
skeletal muscle satellite cell
8
1
skeletal muscle cell
2
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