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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
0
snATAC-seq
Assay category
22
DNA binding
Target of assay
757
histone
757
histone modification
389
narrow histone mark
368
broad histone mark
155
control
50
transcription factor
22
RNA binding protein
Date released
5
May, 2021
5
May, 2024
4
May, 2019
3
April, 2019
3
June, 2019
1
August, 2021
1
November, 2019
Available data
104
bigWig
103
bed narrowPeak
100
bam
91
bigBed narrowPeak
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
22
Homo sapiens
Biosample type
12
tissue
5
in vitro differentiated cells
3
primary cell
2
cell line
Organ
11
heart
4
epithelium
3
blood vessel
kidney
3
vasculature
1
artery
1
connective tissue
1
eye
1
liver
1
pancreas
Project
22
AMP
Genome assembly (visualization)
16
GRCh38
12
hg19
Lab
11
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
files.file_type!
fastq
organ_slims!
kidney
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
tissue
left cardiac atrium
5
heart left ventricle
3
ascending aorta
1
coronary artery
1
right atrium auricular region
1
+ See 1 more…
in vitro differentiated cells
embryonic stem cell
5
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
retinal pigment epithelial cell
1
cell line
EndoC_BH1
1
HepG2
1
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