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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
64
ATAC-seq
59
total RNA-seq
18
ChIP-seq
6
snATAC-seq
5
STARR-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
18
DNA binding
Target of assay
16
control
2
broad histone mark
2
histone
2
histone modification
Date released
125
November, 2017
123
August, 2017
64
October, 2019
42
May, 2021
40
May, 2024
29
October, 2018
23
May, 2019
23
May, 2020
17
December, 2017
15
April, 2019
14
August, 2021
9
November, 2018
9
October, 2017
8
February, 2018
8
June, 2019
4
December, 2018
4
January, 2019
4
September, 2017
3
February, 2021
2
November, 2019
Available data
13
bam
9
tagAlign
4
fastq
1
bed narrowPeak
1
bigWig
Organism
18
Homo sapiens
Biosample type
9
in vitro differentiated cells
7
cell line
1
primary cell
1
tissue
Organ
5
liver
3
blood
3
bodily fluid
1
epithelium
1
spleen
Project
18
AMP
Genome assembly (visualization)
hg19
37
GRCh38
Lab
14
AMP-T2D consortium
4
Bing Ren, UCSD
assembly!
hg19
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
in vitro differentiated cells
neural progenitor cell
9
cell line
HepG2
4
GM12878
3
primary cell
hepatocyte
1
tissue
spleen
1
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