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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
180
ChIP-seq
16
total RNA-seq
14
ATAC-seq
8
DNase-seq
5
Hi-C
1
FAIRE-seq
Assay category
180
DNA binding
Target of assay
171
histone
171
histone modification
119
narrow histone mark
52
broad histone mark
7
recombinant protein
7
transcription factor
2
control
Date released
281
November, 2017
178
October, 2019
173
August, 2017
123
May, 2021
97
May, 2019
77
December, 2017
65
April, 2019
61
November, 2018
45
October, 2018
32
September, 2018
30
December, 2018
29
August, 2021
27
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
11
November, 2019
6
October, 2017
5
February, 2021
3
March, 2020
2
September, 2017
Available data
178
bam
176
bigWig
174
bed narrowPeak
58
bigBed narrowPeak
40
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
fastq
1
tagAlign bed3+
Organism
180
Homo sapiens
Biosample type
149
tissue
18
primary cell
13
cell line
Organ
77
brain
42
limb
30
blood vessel
30
vasculature
24
nerve
18
artery
18
epithelium
15
kidney
12
vein
8
pancreas
5
heart
5
liver
1
pituitary gland
Project
180
AMP
Genome assembly (visualization)
180
hg19
178
GRCh38
Lab
180
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
files.file_type!
cool
BIOSAMPLE
ASSAY
180 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
24
tibial artery
18
brain
5
heart
5
liver
5
+ See 77 more…
primary cell
endothelial cell of umbilical vein
12
epithelial cell of proximal tubule
6
cell line
Panc1
6
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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