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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
374
ChIP-seq
26
total RNA-seq
14
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
374
DNA binding
Target of assay
299
transcription factor
78
recombinant protein
56
histone
56
histone modification
55
RNA binding protein
29
narrow histone mark
27
broad histone mark
22
chromatin remodeller
16
control
5
other context
5
other post-translational modification
Date released
281
November, 2017
178
October, 2019
173
August, 2017
123
May, 2021
97
May, 2019
77
December, 2017
65
April, 2019
61
November, 2018
45
October, 2018
32
September, 2018
30
December, 2018
29
August, 2021
27
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
11
November, 2019
6
October, 2017
5
February, 2021
3
March, 2020
2
September, 2017
Available data
374
bigWig
373
bam
368
fastq
352
bed narrowPeak
319
bigBed narrowPeak
70
bed broadPeak
64
bigBed broadPeak
18
tagAlign
3
tar
Organism
374
Homo sapiens
Biosample type
320
cell line
41
primary cell
13
tissue
Organ
312
liver
32
pancreas
27
epithelium
15
brain
12
blood
12
bodily fluid
6
vasculature
3
blood vessel
3
spleen
Project
374
AMP
Genome assembly (visualization)
375
GRCh38
374
hg19
Lab
374
AMP-T2D consortium
Audit category:
44
missing controlled_by
Audit category:
26
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
374 results
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Clear Filters
ChIP-seq
cell line
HepG2
308
GM12878
12
primary cell
pancreatic ductal cell
13
pancreatic endocrine cell
11
pancreatic acinar cell
8
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
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tissue
liver
4
spleen
3
cingulate gyrus
2
middle frontal area 46
2
caudate nucleus
1
+ See 1 more…
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