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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
total RNA-seq
84
RNA microarray
24
ChIP-seq
22
ATAC-seq
8
single cell RNA-seq
7
pCHi-C
4
Hi-C
3
DNase-seq
1
RRBS
Assay category
24
DNA binding
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
4
transcription factor
3
control
1
RNA binding protein
Date released
19
June, 2019
3
May, 2021
2
October, 2019
Available data
24
bam
21
bed narrowPeak
21
bigWig
16
bigBed narrowPeak
3
tagAlign
Organism
24
Homo sapiens
Biosample type
19
primary cell
cell line
3
in vitro differentiated cells
2
tissue
Organ
11
connective tissue
epithelium
8
musculature of body
6
kidney
4
embryo
4
heart
2
brain
Project
24
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
24
AMP-T2D consortium
Audit category:
27
inconsistent control
24
inconsistent ontology term
biosample_type!
cell line
organ_slims!
epithelium
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
4
in vitro differentiated cells
cardiomyocytes
3
tissue
brodmann area 43
1
insular gyrus
1
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