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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
103
histone
103
histone modification
56
broad histone mark
48
control
47
narrow histone mark
13
transcription factor
8
RNA binding protein
Date released
23
August, 2017
11
October, 2018
4
November, 2019
3
March, 2020
3
October, 2019
2
May, 2021
1
May, 2019
Available data
43
bed narrowPeak
43
bigWig
41
bam
22
fastq
19
bigBed narrowPeak
7
tagAlign
4
bed broadPeak
3
bed bed3+
Organism
45
Homo sapiens
Biosample type
29
tissue
9
cell line
8
primary cell
1
in vitro differentiated cells
Organ
brain
59
liver
47
pancreas
40
heart
38
epithelium
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
nerve
7
embryo
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
43
AMP
4
T1D
Genome assembly (visualization)
43
hg19
41
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
6
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
brain
BIOSAMPLE
ASSAY
47 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
13
body of pancreas
6
endocrine pancreas
6
pancreas
4
cell line
EndoC_BH1
6
Panc1
3
primary cell
pancreatic alpha cell
4
pancreatic beta cell
4
in vitro differentiated cells
pancreatic PP cell
1
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