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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
RNA microarray
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snATAC-seq
Assay category
6
DNA binding
Target of assay
5
histone
5
histone modification
3
broad histone mark
2
narrow histone mark
1
control
Date released
6
August, 2017
Available data
6
bam
6
fastq
6
tagAlign
5
bed broadPeak
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
Organism
Homo sapiens
Biosample type
6
tissue
Organ
6
pancreas
Project
6
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
6
AMP-T2D consortium
Audit category:
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
month_released!
February, 2020
organ_slims!
limb
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
tissue
pancreas
6
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