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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 197total RNA-seq
  • 141single cell RNA-seq
  • 88ChIP-seq
  • 76snATAC-seq
  • 60ATAC-seq
  • 47WGBS
  • 17pCHi-C
  • 4Hi-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 2HiChIP
  • 1CRISPR RNA-seq
  • 1CRISPRi RNA-seq
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
Assay category
  • 88DNA binding
Target of assay
  • 88histone
  • 88histone modification
  • 44broad histone mark
  • 44narrow histone mark
Date released
  • 85May, 2021
  • 3March, 2020
Available data
  • 88bam
  • 88bed narrowPeak
  • 88bigWig
  • 84tagAlign
Organism
  • 88Homo sapiens
Biosample type
  • 84primary cell
  • 2cell line
  • 2tissue
Organ
  • 4pancreas
  • 2epithelium
Project
  • AMP
  • 88T1D
Genome assembly (visualization)
  • 88GRCh38
  • 88hg19
Lab
  • 84Kyle Gaulton, UCSD
  • 4AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
award.project!
  • AMP
BIOSAMPLE
ASSAY

88 results

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ChIP-seq
primary cell
monocyte84
cell line
EndoC_BH12
tissue
islet of Langerhans2
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