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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
333
ChIP-seq
Assay category
333
DNA binding
Target of assay
197
transcription factor
68
control
66
recombinant protein
65
histone
65
histone modification
40
broad histone mark
30
RNA binding protein
25
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
333
November, 2017
218
October, 2019
217
August, 2017
115
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
44
May, 2021
40
May, 2024
39
August, 2021
34
December, 2018
25
January, 2019
24
February, 2018
November, 2019
12
October, 2017
8
February, 2021
6
September, 2017
3
March, 2020
Available data
383
bam
325
bigWig
315
fastq
307
bed narrowPeak
306
bigBed narrowPeak
78
tagAlign
bed broadPeak
58
bigBed broadPeak
3
tar
Organism
333
Homo sapiens
Biosample type
257
cell line
76
tissue
primary cell
Organ
257
liver
76
brain
Project
333
AMP
Genome assembly (visualization)
225
GRCh38
208
hg19
Lab
333
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
biosample_type!
primary cell
files.file_type!
bed broadPeak
month_released!
November, 2019
BIOSAMPLE
ASSAY
333 results
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Clear Filters
ChIP-seq
cell line
HepG2
257
tissue
layer of hippocampus
22
caudate nucleus
14
substantia nigra
14
cingulate gyrus
12
middle frontal area 46
12
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