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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
DNase-seq
25
ChIP-seq
4
ATAC-seq
2
Capture-C
2
pCHi-C
2
total RNA-seq
Assay category
25
DNA binding
Target of assay
13
histone
13
histone modification
7
narrow histone mark
6
broad histone mark
6
control
6
transcription factor
Date released
15
December, 2017
7
August, 2017
3
August, 2021
Available data
856
bam
775
bigWig
730
bed narrowPeak
637
fastq
424
bigBed narrowPeak
160
tagAlign
79
bed broadPeak
79
bigBed broadPeak
25
bed bed3+
3
tar
Organism
25
Homo sapiens
Biosample type
tissue
19
in vitro differentiated cells
3
primary cell
3
stem cell
Organ
7
connective tissue
3
embryo
3
epithelium
3
liver
Project
25
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
25
AMP-T2D consortium
Audit category:
10
inconsistent control read length
biosample_type!
tissue
files.file_type!
hdf5
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
in vitro differentiated cells
adipocyte
7
Posterior foregut
3
definitive endodermal cell
3
pancreatic endoderm
3
primitive gut cell
3
primary cell
hepatocyte
3
stem cell
hESC
3
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