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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
153
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
153
DNA binding
Target of assay
124
histone modification
123
histone
73
broad histone mark
50
narrow histone mark
29
control
transcription factor
2
RNA binding protein
Date released
194
October, 2019
153
August, 2017
111
May, 2019
82
November, 2017
74
April, 2019
59
October, 2018
50
May, 2020
35
May, 2024
17
December, 2017
15
October, 2017
7
January, 2019
6
September, 2017
4
December, 2018
3
November, 2018
2
March, 2020
Available data
60
bigWig
59
tagAlign
57
bed narrowPeak
52
bam
52
fastq
26
bed broadPeak
18
bigBed narrowPeak
13
bed bed3+
Organism
146
Homo sapiens
Biosample type
153
tissue
51
primary cell
45
in vitro differentiated cells
Organ
49
pancreas
44
liver
38
adipose tissue
38
connective tissue
22
musculature of body
Project
153
AMP
Genome assembly (visualization)
61
hg19
41
GRCh38
Lab
153
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
organ_slims!
pituitary gland
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
153 results
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ChIP-seq
tissue
liver
44
subcutaneous abdominal adipose tissue
36
islet of Langerhans
35
skeletal muscle tissue
22
pancreas
14
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