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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ATAC-seq
74
total RNA-seq
71
ChIP-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
5
pCHi-C
4
Capture-C
3
RRBS
1
CRISPR genome editing followed by sgRNA sequencing
1
RNA microarray
Assay category
71
DNA binding
Target of assay
58
histone
58
histone modification
36
broad histone mark
22
narrow histone mark
13
control
Date released
70
August, 2017
1
October, 2019
Available data
bam
237
fastq
236
bigWig
198
bed narrowPeak
74
bigBed narrowPeak
41
tagAlign
32
bed bed3+
13
bed broadPeak
Organism
71
Homo sapiens
Biosample type
57
tissue
14
in vitro differentiated cells
Organ
51
connective tissue
42
liver
41
heart
36
adipose tissue
22
brain
22
musculature of body
20
pancreas
4
gonad
4
ovary
2
eye
1
limb
1
lymph node
Project
71
AMP
Genome assembly (visualization)
7
hg19
Lab
71
AMP-T2D consortium
files.file_type!
bam
month_released!
March, 2019
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
islet of Langerhans
21
in vitro differentiated cells
adipocyte
14
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