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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
Assay category
92
DNA binding
Target of assay
49
transcription factor
31
histone
31
histone modification
17
narrow histone mark
14
broad histone mark
12
control
11
RNA binding protein
1
chromatin remodeller
1
other context
1
other post-translational modification
Date released
58
November, 2017
33
August, 2017
1
October, 2018
Available data
93
bam
93
fastq
91
bigWig
81
bed narrowPeak
50
bigBed narrowPeak
9
bed broadPeak
8
bigBed broadPeak
3
tar
bed bed3+
1
tagAlign
Organism
91
Homo sapiens
Biosample type
51
cell line
31
in vitro differentiated cells
8
primary cell
2
tissue
Organ
51
liver
31
connective tissue
7
brain
4
epithelium
4
vasculature
2
blood vessel
2
pancreas
Project
92
AMP
Genome assembly (visualization)
90
hg19
59
GRCh38
Lab
92
AMP-T2D consortium
Audit category:
5
missing controlled_by
files.file_type!
bed bed3+
replication_type!
anisogenic
BIOSAMPLE
ASSAY
92 results
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ChIP-seq
cell line
HepG2
51
in vitro differentiated cells
adipocyte
31
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
skeletal muscle myoblast
1
tissue
pancreas
2
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