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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
Assay category
79
DNA binding
Target of assay
42
transcription factor
21
histone
21
histone modification
16
control
11
narrow histone mark
10
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
315
November, 2017
263
August, 2017
165
May, 2021
158
October, 2019
92
May, 2019
80
April, 2019
79
December, 2017
74
October, 2018
70
November, 2018
50
May, 2020
40
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
13
November, 2019
8
February, 2021
4
September, 2017
3
March, 2020
Available data
94
bam
94
fastq
72
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
bed bed3+
Organism
79
Homo sapiens
Biosample type
48
tissue
31
in vitro differentiated cells
Organ
63
liver
19
epithelium
10
embryo
Project
79
AMP
Genome assembly (visualization)
62
GRCh38
62
hg19
Lab
79
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
files.file_type!
bed bed3+
organ_slims!
brain
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
6
Hepatic endoderm
4
Posterior foregut
2
definitive endodermal cell
2
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