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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
28
ChIP-seq
2
single cell RNA-seq
Assay category
28
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
19
October, 2019
6
February, 2021
3
May, 2019
Available data
28
bam
19
bed narrowPeak
19
bigWig
15
bigBed narrowPeak
6
tagAlign
Organism
28
Homo sapiens
Biosample type
22
tissue
6
cell line
Organ
488
liver
130
pancreas
109
connective tissue
101
brain
94
heart
79
epithelium
76
vasculature
74
blood vessel
59
blood
59
bodily fluid
57
adipose tissue
51
limb
37
kidney
28
artery
27
nerve
26
musculature of body
18
spleen
12
embryo
11
vein
2
eye
Project
28
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
28
AMP-T2D consortium
files.file_type!
bed bed3+
organ_slims!
esophagus
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
tissue
tibial artery
19
coronary artery
3
cell line
smooth muscle cell of the coronary artery
6
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