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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
ChIP-seq
30
total RNA-seq
19
ATAC-seq
10
snATAC-seq
9
single cell RNA-seq
5
Hi-C
4
pCHi-C
2
DNase-seq
Assay category
182
DNA binding
Target of assay
136
histone
136
histone modification
121
narrow histone mark
39
control
15
broad histone mark
7
recombinant protein
7
transcription factor
Date released
244
August, 2017
182
October, 2019
165
May, 2021
87
November, 2017
50
May, 2020
44
December, 2017
43
August, 2021
40
May, 2024
32
September, 2018
29
October, 2018
24
February, 2018
23
May, 2019
16
April, 2019
13
November, 2019
9
October, 2017
8
February, 2021
8
June, 2019
7
November, 2018
6
September, 2017
4
December, 2018
4
January, 2019
3
March, 2020
0
April, 2020
Available data
219
bam
176
bigWig
174
bed narrowPeak
bigBed narrowPeak
49
tagAlign
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
182
Homo sapiens
Biosample type
153
tissue
17
cell line
12
primary cell
Organ
84
brain
21
kidney
17
limb
12
epithelium
11
nerve
10
blood vessel
10
vasculature
7
pancreas
5
artery
5
heart
5
liver
5
vein
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
182
AMP
Genome assembly (visualization)
118
GRCh38
118
hg19
Lab
182
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
files.file_type!
bed broadPeak
bigBed narrowPeak
BIOSAMPLE
ASSAY
182 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
21
tibial nerve
11
brain
5
heart
5
liver
5
+ See 77 more…
cell line
Panc1
7
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
epithelial cell of proximal tubule
7
endothelial cell of umbilical vein
5
See all biosamples
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