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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
17
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
Assay category
48
DNA binding
Target of assay
28
control
20
histone
20
histone modification
11
narrow histone mark
9
broad histone mark
Date released
27
November, 2017
9
October, 2017
9
October, 2019
3
May, 2019
Available data
196
bam
172
bigWig
bed narrowPeak
118
tagAlign
94
bigBed narrowPeak
18
fastq
15
bed broadPeak
6
bigBed broadPeak
1
tagAlign bed3+
Organism
48
Homo sapiens
Biosample type
45
tissue
3
primary cell
Organ
139
liver
95
connective tissue
78
pancreas
66
adipose tissue
48
brain
32
epithelium
27
vasculature
26
blood vessel
20
heart
18
limb
13
kidney
12
musculature of body
11
nerve
9
artery
8
embryo
8
spleen
7
vein
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
1
lymph node
Project
48
AMP
Genome assembly (visualization)
5
hg19
2
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
bed narrowPeak
month_released!
July, 2018
organ_slims!
bone marrow
BIOSAMPLE
ASSAY
48 results
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ChIP-seq
tissue
brain
9
cingulate gyrus
7
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
+ See 12 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
See all biosamples
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