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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
184
ChIP-seq
30
total RNA-seq
19
ATAC-seq
5
Hi-C
4
pCHi-C
2
DNase-seq
Assay category
184
DNA binding
Target of assay
138
histone
138
histone modification
121
narrow histone mark
39
control
17
broad histone mark
7
recombinant protein
7
transcription factor
Date released
264
August, 2017
184
October, 2019
165
May, 2021
94
November, 2017
50
May, 2020
44
December, 2017
40
May, 2024
32
September, 2018
29
October, 2018
25
August, 2021
24
February, 2018
23
May, 2019
16
April, 2019
13
November, 2019
9
October, 2017
8
February, 2021
8
June, 2019
7
November, 2018
6
September, 2017
4
December, 2018
4
January, 2019
3
March, 2020
Available data
219
bam
176
bigWig
174
bed narrowPeak
bigBed narrowPeak
49
tagAlign
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
184
Homo sapiens
Biosample type
153
tissue
17
cell line
14
primary cell
Organ
84
brain
21
kidney
17
limb
14
epithelium
12
blood vessel
12
vasculature
11
nerve
7
pancreas
7
vein
5
artery
5
heart
5
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
184
AMP
Genome assembly (visualization)
120
hg19
118
GRCh38
Lab
184
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
files.file_type!
bigBed narrowPeak
lab.title!
Bing Ren, UCSD
month_released!
February, 2023
BIOSAMPLE
ASSAY
184 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
21
tibial nerve
11
brain
5
heart
5
liver
5
+ See 77 more…
cell line
Panc1
7
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
endothelial cell of umbilical vein
7
epithelial cell of proximal tubule
7
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