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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
63
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
63
DNA binding
Target of assay
51
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
63
bam
55
bed narrowPeak
55
bigWig
32
fastq
23
bigBed narrowPeak
Organism
63
Homo sapiens
Biosample type
63
primary cell
Organ
32
pancreas
27
epithelium
12
connective tissue
10
musculature of body
5
heart
3
eye
3
kidney
Project
63
AMP
Genome assembly (visualization)
55
GRCh38
55
hg19
Lab
63
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
32
missing controlled_by
files.file_type!
ibed
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
primary cell
pancreatic ductal cell
13
pancreatic endocrine cell
11
pancreatic acinar cell
8
skeletal muscle satellite cell
8
mesenchymal stem cell
7
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