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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
total RNA-seq
81
ChIP-seq
39
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
81
DNA binding
Target of assay
55
histone
55
histone modification
32
broad histone mark
23
narrow histone mark
14
control
12
transcription factor
5
RNA binding protein
Date released
328
November, 2017
211
August, 2017
October, 2019
120
May, 2019
94
December, 2017
80
April, 2019
75
May, 2021
74
October, 2018
70
November, 2018
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
19
August, 2021
13
November, 2019
6
September, 2017
3
March, 2020
1
October, 2017
Available data
123
bigWig
120
bed narrowPeak
97
bam
tagAlign
6
fastq
2
bed bed3+
Organism
81
Homo sapiens
Biosample type
37
in vitro differentiated cells
37
primary cell
6
tissue
1
cell line
Organ
7
pancreas
1
epithelium
Project
80
AMP
1
T1D
Genome assembly (visualization)
36
hg19
3
GRCh38
Lab
70
Kyle Gaulton, UCSD
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tagAlign
month_released!
October, 2019
BIOSAMPLE
ASSAY
81 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
37
primary cell
CD8-positive, alpha-beta T cell
33
naive thymus-derived CD4-positive, alpha-beta T cell
2
monocyte
1
neutrophil
1
tissue
islet of Langerhans
6
cell line
EndoC_BH1
1
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